(IUCr) Crystallographic software list

XRDA XRDA 3.1 is meant to accomplish the complete handling and analysis of X-ray diffraction data, recorded in either the energy-dispersive or angle-dispersive ...   Login Crystallographicresources iucr  >  resources  >  otherdirectories  >  software SoftwaredirectorySearchforsoftwareAddnewsoftwareentryAddnewentry(in-house)SoftwaremuseumOldmanualsCrystallographicneXus Crystallographicsoftwarelist Browsebyinitialletter:ABCDEFGHIJKLMNOPQRSTUVWXYZ[Other]orsearchforasoftwarepackage X0hWebinterfacetocomputecrystalsusceptibilitiesformedium-energyX-rays(0.1–10Å)forsomecrystals.AlsoprovidestheBraggpeakhalfwidth,extinctionandabsorptionlengths.UsesInternationalTablesforf'andf"andinterpolatesthemforintermediatewavelengthswiththehelpofalgorithm.Resultsmustbetreatedwithcareinaclosevicinityofabsorptionedges.Lugovskaya,O.M.&Stepanov,S.A.(1991).Sov.Phys.Crystallogr.36,478–481. XABS2EmpiricalabsorptioncorrectionprogramfromDavis XActApplicationthatcanbeusedtoconstruct,maintain,andrecordtheresultsofmanycrystallisationexperiments.Throughanextensiveobject-orienteddatastructure,theprogramsupportsmultipleuserseachwithmanycrystallisationexperimentsorganisedinahierarchicalfashion. XAS-CollectFlexibleuser-friendlystandardforXASdataacquisition.Incorporatesautomatedfeaturesanddesigntofacilitatearapidexperimentalstartup.Tofurtherassistinstartup,thesoftwarehasbeendesignedtoperformanXASexperimentinlogicalsteps,startingwithbeamlinealignment,thendetectorsetup,filepreparation,andinitializinganexperimentalrun. XBroadApublicdomainprogramdesignedforeasydeterminationofbasicmicrostructuralinformationfrompowderX-raydiffractiondata. XCAD4Lp-correctionofENRAF-NONIUSCAD4-diffractometerdata.ProgramwrittenbyKlausHarms,UniversityofMarburg. XCrySDenXCrySDenisacrystallineandmolecularstructurevisualisationprogramaimingatdisplayofisosurfacesandcontours,whichcanbesuperimposedoncrystallinestructuresandinteractivelyrotatedandmanipulated.ItrunsonGNU/Linux. XD2016AComputerProgramPackageforMultipoleRefinement,TopologicalAnalysisofChargeDensitiesandEvaluationofIntermolecularEnergiesfromExperimentalandTheoreticalStructureFactors XDSAPPGraphicaluserinterfacefortheconvenientprocessingofdiffractiondatausingXDS. XFITPeakfittingprogrambyAlanCoelhoandBobCheary. XITEX-basedImageprocessingToolsandEnvironment XLAT(LSQ)programforthepreciserefinementofcellconstants.Limitedtothemorefrequentcasesofhighersymmetry,ie.cubic,tetragonal,hexagonalandorthorhombicunitcells. XLMCTEPGraphicrepresentationofsmallcrystallographicstructures. XmMolXmMolisadesktopmacromolecularvisualizationandmodelingtooldesignedtobeeasytouse,configureandenhance.Includes:interactivegraphicsofmacromolecules,strongabilitytobeinterfacedwithexternalprograms,somemodellingtoolsandmore. XMolMoleculeviewerandformatconverterdevelopedbyMinnesotaSupercomputerCenter,Inc.(MSCI). XNDRietveldrefinementprogramforrealtimepowderdiffractionpatterns.Theaimoftheprogramistoprovideaneasyapproachtothetreatmentofmultiplediffractionpatternsarisingfromalargenumberofphysicalandchemicalproblemsasthestudyofphasetransitionandintherealtimemonitoringofreactions.http://www.mx.iucr.org/iucr-top/comm/cpd/Newsletters/no20summer1998/art04/art04.htm XopWidgetbasedinterfacewhichdrivesdifferentprogramstocomputesynchrotronradiationsourcespectra(bendingmagnet,wigglersandundulators),reflectionandtransmissioncharacteristicsofopticalelementssuchasmirror,filters,flatcrystals,bentperfectcrystals,andmultilayers.Alsoincludesprogramsformulti-purposedataanalysisandvisualization. XPACEPythonscripttostoreandanalysetheoutcomeofthefactorialdesignsofmacromolecularcrystallizationexperimentsforX-raydiffraction. X-PLORSimulatedannealingrefinement.Thenewrelease,X-PLOR98.0offerssubstantialnewcapabilitiesforbothX-raycrystallographicandNMRstructurerefinementincluding:maximumlikelihoodmethodsforX-raystructurerefinement;optimizedtorsionangledynamic(TAD)methods;ValidatedscriptsforTADwithNMRdistancerestraints;ambiguousrestraintsforiterativeassignment(ARIA)technology;noveltechnologyforNOErefinement. X-PLORGUIGraphicaluserinterfacetofacilitateinputofdata,submissionofcomputationtasksandprogressmonitoringforX-PLORjobs. X-PLORHeterocompoundslibraryX-PLORtopologyandparameterfilesforheterocompounds.TheentriesweregeneratedautomaticallywiththeXPLO2Dprogramfromthehetero.pdbcollectionfromUppsala. XPLOTManipulationofXRDscandataforpowderedsamples. XPMAMouse-drivenmenu-basedgraphicalprogramforthemanipulationofcrystalstructures. XPowderThisprogramcancollectdatafromdiffractometer(fromanykindofdiffractometer),thissoftwareincludessomeanalysistools.Seealsohttp://www.xpowder.com/ XR95SimulationofdiffractionpatternsforvariousX-raytechniques. XRAYACSLPcorrectionsforsinglecrystalX-raydatafromCAD4forSHELXsetofprograms.Alsoempiricalabsorptioncorrections(onForF^2)using(upto100setsof)psidata!orsimilartoDIFABS(referencesaregivenintheprogram).Otherminorprogramsareavailable. Xraydif1Sharewareversionoftheoretical,X-ray powderdiffraction,profilesimulatorbyToddWarrenSnyder. X-RayDiffractionSimulatorProvidesagraphicaluserinterfacetoacomputersimulationofx-raypowderdiffractionoftwo-dimensionalcrystals. X-RayinteractionwithmatterAnumberofX-raycalculationsthroughawebform.Forinstance:X-rayreflectivity,X-raytransmission. XRAYSCANIndexingprogramconsideringdensespuriouspeaksinanoptimizationmethod.Hwang,J.S.&Tien,C.(1996).Chin.J.Phys.34,47-57.http://psroc.phys.ntu.edu.tw/cjp/download.php?d=1&pid=515 XRayViewTeachingAidforX-rayCrystallography XRD2DScanToolfordisplayingandanalyzingtwo-dimensional(2D)X-raydiffractionpatternscollectedusingadiffractometerequippedwitha2Dorareadetector.Canfindthedirectbeamorthepatterncenterevenwhendetectorisataangledifferentfromzero.Itcancalculateddifferenttypesofscans,alsoworkinbatchmodetoanalysemanydatafiles. XRDAXRDA3.1ismeanttoaccomplishthecompletehandlingandanalysisofX-raydiffractiondata,recordedineithertheenergy-dispersiveorangle-dispersivemode.Theanalysisperseisdonefollowingsixmajorsteps:(1)peakprofilefittingsusingpresetcommonprofilefunctionsoruser-definedprofilefunctions(2)organizationofX-raydiffractionlinesunderdifferentgroups(phases)ifapatternisoneofamulti-phasesample(3)assignmentofMillerindicestothefittedlines(4)definitionoftheBravaislatticeandtheatomicpositionsforeachphaseasrequired(5)latticeparameterfittinganddiffractionintensitycalculation. XRDCALCPowderdiffractionutilityforconvertingandplottingpowderdiffractiondata.Calculatesd-spacingsandtwo-thetaandplotstwo-thetaord-spacingvsintensitystickplotsandpeakprofiles. XrfTableAprogramthatcomputesX-rayexcitationandabsorptionwavelengthandreplacesthetraditionalcrystaltable.ItactsalsoasanXRFspectrometersimulator,whichhelpspredictingmostproblemscommonlyencounteredbythespectroscopist.Nowobsolete. XRSX-rayRietveldsystemcollectionofprogramsforcrystalstructuralanalysiswithpowderdiffractiondata.Itprovidesroutinesatalllevelsoftheanalysis-examplesareFouriertransformsandleast-squaresrefinements,andalsoprogramstoaidintheinterpretationandpublicationoftherefinedresults. XR-shapeSubprogramofXR95compiledforseparaterelease.Itallowsyoutodrawthehabitofacrystalaftergivingtheindicesoftheplanes(hkl)andtheirdistancesfromtheorigin.T XRSVaprogramfordisplayingstructureonaPC-AT. XtalPackageof60programsorientedtowardssmallmoleculeautomatedstructuresolution,refinement,visualization,preparingpublicationqualitytablesandORTEPs,CIFreadingandwriting.Additionalleaningstowardshighprecisionchargedensitywork-atomicchargecalculations,contourandelectricfieldmaps+powderpatterncalculationandvisualization.DevelopedattheUniversityofWesternAustralia. Xtal-3D3DcrystalstructuresinVRMLfromtheILLDiffractionGroup. XTAL4POVCrystalshapegeneratorbyKlausKosten, [email protected] Xtalbasedatamanagementsystemformacromolecularcrystallography.Developedinordertoaidthecrystallographerindesigning,preparing,documentingandevaluatingcrystallizationexperiments. XtaldrawInteractivecomputergraphicsprogram.Displays,manipulatesandanalyzesballandstick,polyhedralandthermalellipsoidcoloreddrawingsofanycrystalstructureormolecule. Xtal_GXXtal_GXconsistsofasubsetoftheXtal3.4programsnecessaryforreadingandwritingCIFs,preparingpublicationqualitypostscriptorHPGLfiguresofmoleculesandcells,andinteractivelydisplayingandmanipulatingthestructuralgeometry.Extensivedocumentationisalsoavailableinpostscriptformat. XtalViewPackageforfittingelectrondensitymapsandsolvingstructuresbyMIRandMADwrittenbyDuncanMcReeatScripps. XYLEMCreateandmanipulatedatabasesubsets. Quicklinks Announcements AssociatesProgramme Blogs BraggPrize CalendarofEvents Commissions CommitteeonData CongressandGeneralAssembly Crystalgrowingcompetition CrystallographicInformationFramework(CIF) Crystallographyaroundtheworld Discussionforums Discussionlists EwaldPrize ExecutiveCommittee FinanceCommittee GenderEquityandDiversityCommittee HistoryoftheUnion InternationalTablesforCrystallography InternationalYearofCrystallography Jobs Journals LachlanCranswickCrystallographicNeXus LightsourcesforAfrica,theAmericas,AsiaandMiddleEastProject(LAAAMP) Membership Meetingssupport Newsletter NobelPrizes Obituaries OpenLabs OUPBookSeries OutreachandEducationFund Photogalleries Publications RSSfeeds Secretariat Softwarelist StatutesandBy-Laws SupportofMeetings Symmetryfont TeachingPamphlets VisitingProfessorshipscheme WorldDirectoryofCrystallographers Copyright©-AllRightsReserved-InternationalUnionofCrystallography